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Phatr24195 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr24195" - CPS III, carbamoyl-phosphate synthase mitochindrial in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr24195CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)    
Predicted Functional Partners:
Phatr25183
Predicted protein (334 aa)
 
  0.999
CPS-II
Predicted protein (1542 aa)
 
0.999
Phatr35101
Predicted protein (570 aa)
   
  0.999
Phatr21116
Argininosuccinate synthase (418 aa)
 
  0.999
Phatr30514
Predicted protein (351 aa)
 
  0.998
Phatr17772
Predicted protein (1313 aa)
   
   
  0.990
Phatr11740
Predicted protein (229 aa)
   
 
  0.990
Phatr27735
Predicted protein (538 aa)
   
   
  0.984
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
   
 
  0.983
Phatr48112
Predicted protein (387 aa)
   
 
  0.968
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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