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Phatr24238 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr24238" - Carbamate kinase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr24238Carbamate kinase (336 aa)    
Predicted Functional Partners:
Phatr30514
Predicted protein (351 aa)
 
  0.824
Phatr9233
Predicted protein (353 aa)
         
  0.504
Phatr15324
Predicted protein (378 aa)
         
  0.504
Phatr11160
Predicted protein (433 aa)
         
  0.504
ACL
Atp-citrate synthase (1082 aa)
         
  0.498
GDCT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine (421 aa)
           
  0.478
GDCT_1
Glycine decarboxylase t-protein (892 aa)
           
  0.478
Phatr18911
Aspartate--ammonia ligase (387 aa)
         
  0.445
CPS-II
Predicted protein (1542 aa)
         
  0.437
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
         
  0.437
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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