STRINGSTRING
PHATR_2432 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_2432" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_2432Predicted protein (305 aa)    
Predicted Functional Partners:
MRE11
Predicted protein (550 aa)
     
 
  0.791
Phatr47361
Predicted protein (489 aa)
     
 
  0.779
Phatr43711
Predicted protein (580 aa)
     
 
  0.779
Phatr13384
Predicted protein (594 aa)
       
 
  0.775
Phatr34920
Predicted protein (275 aa)
     
 
  0.622
Phatr54612
Ercc4-like protein (736 aa)
     
 
  0.579
Phatr49149
Predicted protein (570 aa)
       
 
  0.541
Phatr13221
Predicted protein (208 aa)
       
 
  0.490
Phatr45914
Predicted protein (746 aa)
     
 
  0.458
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
     
 
  0.451
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (6%) [HD]