STRINGSTRING
Phatr24514 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr24514" - Methionine aminopeptidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr24514Methionine aminopeptidase (326 aa)    
Predicted Functional Partners:
PheRS
Phenylalanyl-trna synthetase class IIc family protein (405 aa)
   
   
  0.726
Phatr17772
Predicted protein (1313 aa)
   
   
  0.722
Phatr10617
Predicted protein (229 aa)
   
 
  0.685
Phatr13361
Predicted protein (389 aa)
   
 
  0.662
Phatr27735
Predicted protein (538 aa)
   
   
  0.656
Phatrdraft977
Predicted protein (334 aa)
   
 
  0.653
Phatr51018
Predicted protein (397 aa)
   
 
  0.653
Phatr12238
Predicted protein (184 aa)
   
 
  0.653
Phatr17304
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (429 aa)
     
 
  0.649
Phatr5769
Predicted protein (190 aa)
   
 
  0.646
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (8%) [HD]