STRINGSTRING
Phatr24935 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr24935" - Helicase_1 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr24935Helicase_1 (455 aa)    
Predicted Functional Partners:
Phatr14145
Predicted protein (516 aa)
     
 
  0.980
Phatr19552
Predicted protein (529 aa)
     
  0.965
Phatr2182
Predicted protein (360 aa)
   
 
  0.943
Phatr46516
Predicted protein (1051 aa)
     
 
  0.939
Phatr14032
Predicted protein (467 aa)
   
 
0.937
Phatr11894
Predicted protein (209 aa)
     
 
  0.933
Phatr45356
Predicted protein (479 aa)
     
 
  0.933
Phatr16814
Predicted protein (662 aa)
     
 
  0.928
Phatr43447
Predicted protein (671 aa)
     
      0.927
Phatr7810
Predicted protein (98 aa)
     
 
  0.921
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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