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Phatr25 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr25" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr25Predicted protein (1589 aa)    
Predicted Functional Partners:
Phatr19982
Predicted protein (2347 aa)
     
  0.989
Phatr45989
Predicted protein (1008 aa)
     
  0.979
Phatr13053
Predicted protein (725 aa)
     
  0.978
Phatrdraft1638
Predicted protein (548 aa)
     
  0.978
Phatr54743
Predicted protein (347 aa)
     
  0.978
Phatr35766
Predicted protein (828 aa)
     
  0.976
Phatr13192
Predicted protein (74 aa)
     
  0.976
Phatr21983
Predicted protein (484 aa)
       
  0.974
Phatr34712
Predicted protein (662 aa)
     
  0.974
Phatr33304
Predicted protein (122 aa)
       
  0.973
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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