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STRINGSTRING
Phatr25298 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr25298" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Phatr25298Predicted protein (505 aa)    
Predicted Functional Partners:
Phatr28737
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
     
 
  0.799
EF-1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
     
 
  0.799
Phatr51092
Glutamine synthetase (416 aa)
     
   
  0.774
HSP70G
Protein heat shock protein; Belongs to the heat shock protein 70 family (901 aa)
     
   
  0.754
CYCP6
Predicted protein (146 aa)
 
            0.641
Phatr43574
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
   
  0.592
Phatr43033
Predicted protein (641 aa)
       
      0.544
Phatr44555
Predicted protein (743 aa)
     
   
  0.479
Phatr47058
Predicted protein (606 aa)
     
        0.474
Phatr46516
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1051 aa)
     
   
  0.456
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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