STRINGSTRING
Phatr25334 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr25334" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr25334Predicted protein (312 aa)    
Predicted Functional Partners:
Phatr18128
Predicted protein (247 aa)
   
  0.752
MARK3
Predicted protein (511 aa)
   
0.729
Phatr8890
Predicted protein (78 aa)
       
  0.718
Phatr11403
Predicted protein (294 aa)
   
 
 
0.711
Phatr48783
Predicted protein (402 aa)
     
  0.695
Phatr35054
Predicted protein (621 aa)
     
  0.695
Phatr32914
Predicted protein (281 aa)
     
  0.695
Phatr15229
Predicted protein (54 aa)
     
  0.695
Phatr47036
Predicted protein (430 aa)
     
0.687
Phatr10291
Predicted protein (303 aa)
   
 
0.570
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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