STRINGSTRING
Phatr2542 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr2542" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr2542Predicted protein (417 aa)    
Predicted Functional Partners:
SDH2
Succinate dehydrogenase iron sulfur protein; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (273 aa)
 
          0.564
ACL
Atp-citrate synthase (1082 aa)
              0.499
Phatr49400
Predicted protein (334 aa)
 
            0.475
Phatr8950
Predicted protein (252 aa)
           
  0.424
Phatr8754
Predicted protein (165 aa)
           
  0.424
Phatr55229
Predicted protein (379 aa)
           
  0.424
hCdc48
Predicted protein (800 aa)
           
  0.424
Phatr4937
Predicted protein (217 aa)
           
  0.424
Phatr42434
Predicted protein (484 aa)
           
  0.424
Phatr41850
Predicted protein (685 aa)
           
  0.424
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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