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Phatr25495 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr25495" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr25495Predicted protein (460 aa)    
Predicted Functional Partners:
Phatr49385
Predicted protein (1125 aa)
     
0.971
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
  0.886
Phatr54677
DNA polymerase (1087 aa)
     
  0.814
POLA
DNA polymerase (1147 aa)
     
  0.811
Phatr52678
DNA polymerase (2155 aa)
     
  0.811
Phatr50124
Predicted protein (1144 aa)
     
  0.811
Phatr44910
Predicted protein (592 aa)
     
  0.726
Phatr43638
Predicted protein (531 aa)
     
  0.726
Phatr48206
Predicted protein (794 aa)
   
  0.673
Phatr46734
Predicted protein (894 aa)
   
  0.673
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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