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STRINGSTRING
Phatr25495 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr25495" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr25495Predicted protein (460 aa)    
Predicted Functional Partners:
Phatr49385
Predicted protein (1125 aa)
     
 
0.958
Phatr50124
Predicted protein (1144 aa)
     
 
  0.859
Phatr44910
Predicted protein (592 aa)
     
 
  0.736
Phatr43638
Predicted protein (531 aa)
     
 
  0.736
Phatr47127
Predicted protein (517 aa)
     
   
  0.586
Phatr41702
Predicted protein (671 aa)
           
  0.582
Phatr1690
Predicted protein (495 aa)
         
  0.580
Phatr48136
Chromatin assembly factor subunit (1435 aa)
     
        0.575
Phatr51407
Pol1-like DNA polymerase (774 aa)
   
 
  0.568
Phatr31781
Predicted protein (379 aa)
   
 
  0.538
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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