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STRINGSTRING
Phatr25666 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr25666" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr25666Predicted protein (885 aa)    
Predicted Functional Partners:
Phatr42495
Predicted protein (1233 aa)
     
 
  0.999
PHATR_1682
Anthranilate synthase. anthranilate synthetase. chorismate lyase (439 aa)
     
 
  0.999
Phatr45871
Predicted protein (944 aa)
     
 
  0.999
Phatr17974
Predicted protein (475 aa)
     
 
  0.999
Phatr44242
Predicted protein (890 aa)
     
 
  0.999
Phatr19552
Predicted protein (529 aa)
     
 
  0.999
Phatr15481
Predicted protein (482 aa)
     
 
  0.999
Phatr43713
Predicted protein (609 aa)
     
 
  0.999
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
     
 
  0.999
Phatr46012
Predicted protein (2229 aa)
     
 
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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