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STRINGSTRING
Phatr26035 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr26035" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr26035Predicted protein (266 aa)    
Predicted Functional Partners:
Phatr18579
Predicted protein (510 aa)
     
 
  0.998
Phatr19552
Predicted protein (529 aa)
     
 
  0.998
Phatr45356
Predicted protein (479 aa)
     
 
  0.997
Phatr9929
Predicted protein (196 aa)
     
 
  0.997
Phatr2182
Predicted protein (360 aa)
     
 
  0.997
Phatr8777
Predicted protein (110 aa)
     
 
  0.992
Phatr14145
Predicted protein (516 aa)
     
 
  0.992
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
     
 
  0.990
Phatr16814
Predicted protein (662 aa)
     
 
  0.990
Phatr11894
Predicted protein (209 aa)
     
 
  0.985
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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