STRINGSTRING
Phatr26176 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr26176" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr26176Predicted protein (408 aa)    
Predicted Functional Partners:
Phatr28737
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
     
  0.995
EF-1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
     
  0.995
Phatr27838
Predicted protein (1040 aa)
     
 
  0.982
rpl2
Predicted protein (257 aa)
     
 
  0.976
GluRS_1
Glutamate-trna ligase (523 aa)
     
  0.975
Phatr31919
Predicted protein (305 aa)
     
      0.971
Phatr23079
Predicted protein (259 aa)
     
 
  0.968
Phatr30660
Predicted protein (273 aa)
     
 
  0.966
Phatr34146
60S ribosomal protein L6 (199 aa)
     
   
  0.966
Phatr25714
Ribosomal protein L15 (205 aa)
     
 
  0.966
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%) [HD]