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Phatr26921 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr26921" - Beta chain succinyl-coa synthetase synthetase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr26921Beta chain succinyl-coa synthetase synthetase (443 aa)    
Predicted Functional Partners:
SCS-alpha
Ligase succinate-coa ligase (309 aa)
  0.999
ACL
Atp-citrate synthase (1082 aa)
   
  0.999
SDH1
Succinate dehydrogenase flavoprotein; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (638 aa)
   
  0.981
Phatr40430
Dihydrolipoamide succinyltransferase (377 aa)
   
  0.979
SDH2
Succinate dehydrogenase iron sulfur protein; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (273 aa)
   
  0.978
Phatr51830
Methylmalonyl-coa mutase (719 aa)
       
  0.972
Phatrdraft1828
Predicted protein (477 aa)
   
  0.957
Phatr38009
Predicted protein (230 aa)
   
  0.957
DHLTA_3
Dihydrolipoamide acetyl transferase (477 aa)
   
  0.957
DHLTA_1
Dihydrolipoamide acetyltransferase (492 aa)
   
  0.957
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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