STRINGSTRING
Phatr27240 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr27240" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr27240Predicted protein (746 aa)    
Predicted Functional Partners:
gshB
Glutathione synthase. glutathione synthetase. GSH synthetase (567 aa)
     
  0.962
Phatr42276
Predicted protein (1263 aa)
       
    0.955
Phatr44775
Predicted protein (580 aa)
         
  0.931
Phatr19513
Predicted protein (717 aa)
         
  0.931
Phatr29309
Predicted protein (842 aa)
         
    0.928
Phatr43697
Branched-chain-amino-acid aminotransferase (356 aa)
         
  0.900
Phatr32849
Predicted protein (299 aa)
         
  0.900
Phatr28585
Branched-chain-amino-acid aminotransferase (326 aa)
         
  0.900
Phatr10779
Predicted protein (359 aa)
         
  0.900
Phatr1884
Predicted protein (435 aa)
         
    0.900
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (3%) [HD]