STRINGSTRING
Phatr27282 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr27282" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr27282Predicted protein (171 aa)    
Predicted Functional Partners:
Phatr34538
Predicted protein (320 aa)
     
  0.989
Phatr42307
Predicted protein (453 aa)
     
  0.981
Phatr10674
Predicted protein (290 aa)
     
  0.932
Phatr8976
Predicted protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (135 aa)
   
  0.927
Phatr46479
Translation initiation factor eif-2bgamma (758 aa)
     
  0.925
Phatr14255
Predicted protein (326 aa)
     
  0.911
Phatr12868
Predicted protein (121 aa)
     
  0.907
Phatr46656
Predicted protein (531 aa)
     
  0.893
Phatr21290
Predicted protein (385 aa)
     
  0.885
Phatr16281
Predicted protein (84 aa)
     
  0.883
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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