STRINGSTRING
Phatr2762 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr2762" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr2762Predicted protein (324 aa)    
Predicted Functional Partners:
ATPse2-2B
P2B, P type ATPase (1032 aa)
       
 
  0.514
Phatr47620
P2B, P type ATPase (1118 aa)
       
 
  0.514
ATPase1-2B
P2B, P type ATPase (1089 aa)
       
 
  0.514
Phatr53964
Probable calcium ATPase (1006 aa)
       
 
  0.479
Phatr23629
Predicted protein (982 aa)
       
 
  0.479
Phatr228
Probable serca-type calcium ATPase (1028 aa)
       
 
  0.479
Phatrdraft1750
Sodium/hydrogen exchanger (546 aa)
       
 
  0.406
Phatr48886
Predicted protein (813 aa)
       
 
  0.406
Phatr43552
Sodium/hydrogen exchanger (971 aa)
       
 
  0.406
Phatr43052
Sodium/hydrogen exchanger (704 aa)
       
 
  0.406
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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