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Phatr27659 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr27659" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr27659Predicted protein (157 aa)    
Predicted Functional Partners:
Phatr11799
Predicted protein (84 aa)
     
  0.998
Phatr10617
Predicted protein (229 aa)
 
  0.996
Phatr12238
Predicted protein (184 aa)
   
  0.996
Phatr14713
Predicted protein (137 aa)
   
  0.996
Phatr12355
Predicted protein (128 aa)
   
  0.995
Phatr37018
Predicted protein (154 aa)
     
    0.991
rpl2
Predicted protein (257 aa)
   
  0.991
Phatr23324
Predicted protein (176 aa)
   
  0.991
Phatr14915
Predicted protein (200 aa)
   
  0.990
Phatr19025
Predicted protein (205 aa)
   
  0.990
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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