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Phatr27838 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr27838" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr27838Predicted protein (1040 aa)    
Predicted Functional Partners:
Phatr26176
Predicted protein (408 aa)
     
 
  0.982
Phatr44242
Predicted protein (890 aa)
     
      0.950
Phatr35766
Predicted protein (828 aa)
   
 
  0.826
ME1
Malic enzyme (560 aa)
     
 
  0.808
Phatr51970
Malic enzyme (555 aa)
     
 
  0.808
Phatr34493
Predicted protein (447 aa)
     
 
  0.787
Phatr15354
Predicted protein (300 aa)
   
   
  0.783
Phatr31919
Predicted protein (305 aa)
   
 
  0.781
Phatr5857
Predicted protein (186 aa)
   
      0.775
GPI_3
Glucose-6-phosphate isomerase (518 aa)
   
      0.775
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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