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STRINGSTRING
Phatr27905 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr27905" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr27905Predicted protein (418 aa)    
Predicted Functional Partners:
Phatr8457
Predicted protein (59 aa)
     
      0.989
Phatr12679
Predicted protein (290 aa)
     
 
  0.989
Phatr36927
Predicted protein (409 aa)
     
 
  0.985
Phatr51007
Predicted protein (296 aa)
     
 
  0.982
Phatr35966
Predicted protein (488 aa)
     
 
  0.974
Phatr21557
Predicted protein (348 aa)
     
 
  0.972
Phatr14145
Predicted protein (516 aa)
     
 
  0.970
Phatr19647
Predicted protein (354 aa)
     
 
  0.960
Phatr43822
Predicted protein (341 aa)
     
 
  0.949
Phatr8777
Predicted protein (110 aa)
     
 
  0.946
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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