STRINGSTRING
Phatr2834 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr2834" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr2834Predicted protein (392 aa)    
Predicted Functional Partners:
Phatr22113
Bifunctional aspartokinase (870 aa)
   
 
  0.804
Phatr7913
Predicted protein (76 aa)
   
  0.746
Phatr7910
Predicted protein (70 aa)
   
  0.746
Phatr55177
Spermine/spermidine synthase (299 aa)
   
  0.746
Phatr51460
Annotation not available (348 aa)
   
  0.746
Phatr13386
Spermine/spermidine synthase (275 aa)
   
  0.746
Phatr11608
Predicted protein (76 aa)
   
  0.746
Phatr38509
Predicted protein (301 aa)
       
  0.723
Phatr34582
Predicted protein (334 aa)
   
 
  0.720
Phatr40880
Agmatinase (416 aa)
       
  0.703
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%) [HD]