Full Link:
STRINGSTRING
Phatr28433 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr28433" - Ubiquitin carrier protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr28433Ubiquitin carrier protein (167 aa)    
Predicted Functional Partners:
Rbx1
Predicted protein (134 aa)
     
  0.946
Phatr37077
Predicted protein (222 aa)
       
0.878
hUbc6
Predicted protein (142 aa)
     
 
0.867
Skp1_3
S-phase kinase-associated protein (158 aa)
     
  0.858
Skp1;2
Predicted protein (175 aa)
     
  0.858
Skp1_1
Predicted protein (169 aa)
     
  0.858
sUbi
Ubiquitin-like protein (268 aa)
       
  0.841
hUbi
Predicted proteinUbiquitin extension protein 4 (381 aa)
       
  0.841
Phatr49037
Predicted protein (205 aa)
       
  0.841
Phatr36569
Predicted protein (166 aa)
       
  0.841
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (6%)