Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2A-3a | H2A-m1 | Phatr34798 | Phatr28445 | Histone H2A | Histone H2A | 0.960 |
H2A-3a | H2B-1a | Phatr34798 | Phatr54360 | Histone H2A | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.996 |
H2A-3a | H3-1a | Phatr34798 | Phatr50872 | Histone H2A | Histone H3 | 0.947 |
H2A-3a | H4-1a | Phatr34798 | Phatr26896 | Histone H2A | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.919 |
H2A-3a | NAP | Phatr34798 | Phatr17779 | Histone H2A | Nucleosome assembly protein | 0.816 |
H2A-3a | Phatr11823 | Phatr34798 | Phatr11823 | Histone H2A | Histone H2B | 0.996 |
H2A-3a | Phatr34971 | Phatr34798 | Phatr34971 | Histone H2A | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.919 |
H2A-3a | Phatr50695 | Phatr34798 | Phatr50695 | Histone H2A | Histone H3 | 0.947 |
H2A-m1 | H2A-3a | Phatr28445 | Phatr34798 | Histone H2A | Histone H2A | 0.960 |
H2A-m1 | H2A-m2 | Phatr28445 | Phatr46020 | Histone H2A | Histone H2A | 0.961 |
H2A-m1 | H2B-1a | Phatr28445 | Phatr54360 | Histone H2A | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.991 |
H2A-m1 | H3-1a | Phatr28445 | Phatr50872 | Histone H2A | Histone H3 | 0.870 |
H2A-m1 | H4-1a | Phatr28445 | Phatr26896 | Histone H2A | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.910 |
H2A-m1 | NAP | Phatr28445 | Phatr17779 | Histone H2A | Nucleosome assembly protein | 0.928 |
H2A-m1 | Phatr11823 | Phatr28445 | Phatr11823 | Histone H2A | Histone H2B | 0.991 |
H2A-m1 | Phatr26802 | Phatr28445 | Phatr26802 | Histone H2A | Histone H2A | 0.960 |
H2A-m1 | Phatr34971 | Phatr28445 | Phatr34971 | Histone H2A | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.910 |
H2A-m1 | Phatr50695 | Phatr28445 | Phatr50695 | Histone H2A | Histone H3 | 0.870 |
H2A-m2 | H2A-m1 | Phatr46020 | Phatr28445 | Histone H2A | Histone H2A | 0.961 |
H2A-m2 | H2B-1a | Phatr46020 | Phatr54360 | Histone H2A | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.996 |
page 1 of 5