STRINGSTRING
Phatr2845 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr2845" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr2845Predicted protein (268 aa)    
Predicted Functional Partners:
Phatr9491
Predicted protein (163 aa)
   
 
0.970
cdc14
Predicted protein (298 aa)
       
 
  0.906
Phatr16032
Predicted protein (422 aa)
   
 
0.827
Phatr10628
Predicted protein (575 aa)
     
 
0.777
Phatr4129
Predicted protein (280 aa)
   
 
0.776
Phatr10539
Predicted protein (328 aa)
   
 
0.776
Phatr8996
Predicted protein (343 aa)
   
 
0.776
hCDK7
Predicted protein (358 aa)
   
 
0.772
Phatr55230
Predicted protein (709 aa)
       
 
  0.766
HSP90
Heat shock protein Hsp90 (780 aa)
       
 
  0.766
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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