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NURF-140 protein (Phaeodactylum tricornutum) - STRING interaction network
"NURF-140" - Imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit in Phaeodactylum tricornutum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NURF-140Imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit (1023 aa)    
Predicted Functional Partners:
Phatr43730
Predicted protein (229 aa)
     
  0.901
Phatr45431
Predicted protein (1158 aa)
     
  0.877
NURF-55
Chromatin assembly factor subunit c (466 aa)
     
  0.862
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
   
  0.855
Phatr13581
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)
   
  0.855
Phatr47992
Predicted protein (432 aa)
     
  0.796
Phatr15555
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1706 aa)
     
  0.795
Phatr19568
Predicted protein (485 aa)
     
  0.790
RNAP-II_2
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1211 aa)
     
  0.775
PHATR_2957
Predicted protein (338 aa)
     
  0.752
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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