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Phatr28620 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr28620" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr28620Predicted protein (136 aa)    
Predicted Functional Partners:
ACPZ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (127 aa)
     
  0.992
Phatr9709
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (71 aa)
     
  0.958
Phatr41645
Predicted protein (166 aa)
     
  0.920
Phatr22919
Predicted protein (260 aa)
     
    0.885
Phatr14260
Predicted protein (163 aa)
     
  0.868
Phatr43944
Predicted protein (493 aa)
     
  0.862
Phatr17671
Predicted protein (397 aa)
     
  0.841
Phatr50525
Predicted protein (688 aa)
     
  0.712
Phatr49844
Predicted protein (255 aa)
     
  0.712
Phatr49580
Predicted protein (247 aa)
     
  0.712
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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