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PMM1 protein (Phaeodactylum tricornutum) - STRING interaction network
"PMM1" - Phosphomannomutase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (249 aa)    
Predicted Functional Partners:
PMI1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family (351 aa)
   
 
  0.991
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
   
 
  0.914
Phatr22554
Mannosyltransferase (419 aa)
   
 
  0.836
Phatr14002
Beta-mannosyltransferase (398 aa)
     
 
  0.834
Phatr9724
Predicted protein (371 aa)
     
   
  0.799
Phatr48523
Predicted protein (551 aa)
           
  0.795
Phatr54621
Glycosyl transferase, family 1 (433 aa)
     
 
  0.710
Phatr32178
Predicted protein (451 aa)
           
  0.696
Phatr43008
Predicted protein (629 aa)
           
  0.690
Phatr47010
Predicted protein (1133 aa)
     
   
  0.685
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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