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Fba3 protein (Phaeodactylum tricornutum) - STRING interaction network
"Fba3" - Cytosolic class II aldolase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fba3Cytosolic class II aldolase (400 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
  0.999
TIM_1
Triosephosphate isomerase (268 aa)
   
  0.994
PGK
Phosphoglycerate kinase (448 aa)
   
  0.991
Phatr29157
Phosphoglycerate kinase (441 aa)
   
  0.991
GapC4
Predicted protein (336 aa)
   
  0.986
GapC2a
Glyceraldehyde-3-phosphate dehydrogenase (334 aa)
   
  0.983
GAPDH_3
Predicted protein (351 aa)
   
  0.983
GapC1
Glyceraldehyde-3-phosphate dehydrogenase (379 aa)
   
  0.983
SBPase
Seduheptulose bisphosphatase (325 aa)
       
  0.973
FBPC1
Fructose-1,6-bisphosphatase (376 aa)
       
  0.973
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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