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Phatr29029 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr29029" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr29029Predicted protein (574 aa)    
Predicted Functional Partners:
Phatr45673
Beta-galactosidase (951 aa)
       
      0.904
Phatr8112
Predicted protein (88 aa)
 
  0.888
Phatr10666
Predicted protein (102 aa)
 
  0.887
Phatr11830
Predicted protein (161 aa)
 
  0.887
Phatr16545
Predicted protein (167 aa)
 
  0.887
Phatr13445
Predicted protein (164 aa)
 
  0.887
Phatr17198
Predicted protein (1052 aa)
 
  0.871
Phatr27385
Predicted protein (697 aa)
   
  0.848
Phatr16963
Glutaminyl-trna synthetase (568 aa)
   
  0.848
GluRS_2
Glutamyl-trna synthase (588 aa)
   
  0.848
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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