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STRINGSTRING
Phatr29212 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr29212" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr29212Predicted protein (317 aa)    
Predicted Functional Partners:
Phatr46078
Predicted protein (1240 aa)
     
 
  0.858
Phatr47067
Predicted protein (1237 aa)
     
   
  0.753
AP1alpha
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration (1019 aa)
           
  0.582
Phatr14103
Predicted protein (298 aa)
           
  0.582
Phatr8828
Predicted protein (291 aa)
           
  0.581
Phatr19152
Predicted protein (157 aa)
     
      0.523
UBI3
Ubiquitin extension protein 3 (155 aa)
     
      0.457
Phatr9860
Predicted protein (318 aa)
   
        0.456
Phatr44047
Predicted protein (463 aa)
   
        0.454
Phatr35973
Predicted protein (317 aa)
       
 
  0.453
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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