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Phatr29456 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr29456" - Glyceraldehyde-3-phosphate dehydrogenase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr29456Glyceraldehyde-3-phosphate dehydrogenase (334 aa)    
Predicted Functional Partners:
Phatrdraft1572
Enolase (464 aa)
   
  0.973
Phatrdraft1192
Annotation not available (457 aa)
   
  0.973
Phatr41515
Enolase (437 aa)
   
  0.973
PGK
Phosphoglycerate kinase (448 aa)
   
  0.971
Phatr29157
Phosphoglycerate kinase (441 aa)
   
  0.971
Phatr14792
Phosphoglycerate kinase (432 aa)
   
  0.964
TIM_1
Triosephosphate isomerase (268 aa)
 
  0.962
Phatr50738
Triosephosphate isomerase (290 aa)
 
  0.962
Phatr18228
Triosephosphate isomerase (298 aa)
 
  0.962
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
 
0.922
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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