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PTD6 protein (Phaeodactylum tricornutum) - STRING interaction network
"PTD6" - Delta 6 fatty acid desaturase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTD6Delta 6 fatty acid desaturase (477 aa)    
Predicted Functional Partners:
PTD5b
Delta 5 fatty acid desaturase (455 aa)
   
   
  0.643
Phatr22510
Predicted protein (453 aa)
   
     
  0.567
PTD12
Precursor of desaturase omega-6 desaturase (495 aa)
     
   
  0.551
FAD2
Delta 12 fatty acid desaturase (436 aa)
     
   
  0.524
PTD9
Desaturase delta 9 desaturase (333 aa)
     
   
  0.520
PTD15
Precursor of desaturase omega-3 desaturase (435 aa)
     
   
  0.475
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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