Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CsdB | IscU | Phatr2966 | Phatr28374 | Selenocysteine lyase | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | 0.987 |
| CsdB | Phatr14478 | Phatr2966 | Phatr14478 | Selenocysteine lyase | Predicted protein | 0.824 |
| CsdB | Phatr14927 | Phatr2966 | Phatr14927 | Selenocysteine lyase | Predicted protein | 0.972 |
| CsdB | Phatr17215 | Phatr2966 | Phatr17215 | Selenocysteine lyase | Predicted protein | 0.883 |
| CsdB | Phatr34373 | Phatr2966 | Phatr34373 | Selenocysteine lyase | Predicted protein; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards URM1. Subsequently, a transient disulfi [...] | 0.923 |
| CsdB | Phatr46031 | Phatr2966 | Phatr46031 | Selenocysteine lyase | Predicted protein | 0.883 |
| CsdB | Phatr46040 | Phatr2966 | Phatr46040 | Selenocysteine lyase | Predicted protein | 0.883 |
| CsdB | Phatr7342 | Phatr2966 | Phatr7342 | Selenocysteine lyase | Predicted protein | 0.824 |
| CsdB | Phatrdraft1259 | Phatr2966 | Phatrdraft1259 | Selenocysteine lyase | Predicted protein | 0.824 |
| CsdB | Phatrdraft1610 | Phatr2966 | Phatrdraft1610 | Selenocysteine lyase | Predicted protein | 0.824 |
| IscU | CsdB | Phatr28374 | Phatr2966 | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | Selenocysteine lyase | 0.987 |
| IscU | Phatr14478 | Phatr28374 | Phatr14478 | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | Predicted protein | 0.902 |
| IscU | Phatr14927 | Phatr28374 | Phatr14927 | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | Predicted protein | 0.976 |
| IscU | Phatr7342 | Phatr28374 | Phatr7342 | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | Predicted protein | 0.877 |
| IscU | Phatrdraft1259 | Phatr28374 | Phatrdraft1259 | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | Predicted protein | 0.877 |
| IscU | Phatrdraft1610 | Phatr28374 | Phatrdraft1610 | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | Predicted protein | 0.877 |
| Phatr14478 | CsdB | Phatr14478 | Phatr2966 | Predicted protein | Selenocysteine lyase | 0.824 |
| Phatr14478 | IscU | Phatr14478 | Phatr28374 | Predicted protein | Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins | 0.902 |
| Phatr14478 | Phatr14927 | Phatr14478 | Phatr14927 | Predicted protein | Predicted protein | 0.614 |
| Phatr14927 | CsdB | Phatr14927 | Phatr2966 | Predicted protein | Selenocysteine lyase | 0.972 |
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