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Phatr29736 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr29736" - Uricase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr29736Uricase (247 aa)    
Predicted Functional Partners:
Phatr15968
Predicted protein (1387 aa)
   
 
  0.976
Phatr49522
5-hydroxyisourate hydrolase (299 aa)
   
 
  0.812
Phatr31650
Solute carrier (590 aa)
   
   
  0.761
Phatr35101
Predicted protein (570 aa)
 
     
  0.681
Phatr52619
Purine permease (593 aa)
   
   
  0.638
Phatr16991
Predicted protein (384 aa)
   
   
  0.638
Phatr3787
Predicted protein (333 aa)
 
   
  0.621
Phatr54892
Predicted protein (523 aa)
     
      0.547
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
   
  0.487
Phatr29702
Predicted protein (878 aa)
           
  0.485
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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