STRINGSTRING
Phatr29758 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr29758" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr29758Predicted protein (895 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
 
  0.568
Phatr44845
Predicted protein (1264 aa)
       
      0.544
Phatr17772
Predicted protein (1313 aa)
   
 
  0.517
Phatr47067
Predicted protein (1237 aa)
     
 
  0.504
Phatr11174
Predicted protein (627 aa)
   
 
  0.486
Phatr25204
Predicted protein (598 aa)
     
 
  0.481
Phatr16856
Beta-glucosidase (441 aa)
       
 
  0.471
ACL
Atp-citrate synthase (1082 aa)
     
 
  0.469
CPS-II
Predicted protein (1542 aa)
   
 
  0.453
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
   
 
  0.453
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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