STRINGSTRING
ACT1 protein (Phaeodactylum tricornutum) - STRING interaction network
"ACT1" - Actin/actin like proteinPredicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT1Actin/actin like proteinPredicted protein (377 aa)    
Predicted Functional Partners:
Phatr15613
Predicted protein (123 aa)
     
  0.952
Phatr9601
Protein of f-actin capping protein (214 aa)
     
 
  0.857
Phatr47992
Predicted protein (432 aa)
       
  0.836
CBP
Calcium binding protein (132 aa)
       
  0.827
CaM2
Calmodulin (154 aa)
       
  0.827
CaM1
Calmoduline (149 aa)
       
  0.827
Phatr21744
Predicted protein (149 aa)
       
  0.827
CATR1
Caltractin (151 aa)
     
  0.803
CATR2
Caltractin (192 aa)
     
  0.803
GEL1
Gelsolin (403 aa)
     
  0.795
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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