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Phatr30145 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr30145" - Citrate synthase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr30145Citrate synthase (471 aa)    
Predicted Functional Partners:
ACL
Atp-citrate synthase (1082 aa)
   
  0.992
MDH
Predicted protein (324 aa)
   
  0.989
DHLTA_1
Dihydrolipoamide acetyltransferase (492 aa)
   
  0.983
Phatrdraft1828
Predicted protein (477 aa)
   
  0.979
Phatr38009
Predicted protein (230 aa)
   
  0.979
DHLTA_3
Dihydrolipoamide acetyl transferase (477 aa)
   
  0.979
DHLTA_2
Dihydrolipoamide acetyl transferase (435 aa)
   
  0.979
ACC2
Biotin carboxylase (2282 aa)
   
  0.965
PYC2
Precursor of carboxylase pyruvate carboxylase (1264 aa)
   
  0.961
MS
Malate synthase (553 aa)
   
 
  0.953
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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