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Phatr30246 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr30246" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr30246Predicted protein (358 aa)    
Predicted Functional Partners:
Phatr19659
Iron-containing dehydrogenase (465 aa)
   
  0.859
FAO1
Peroxisomal bifunctional enzyme (767 aa)
       
  0.740
Phatr35240
Predicted protein (684 aa)
       
  0.740
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
     
 
  0.719
Phatr17427
Predicted protein (695 aa)
 
 
0.661
Phatr27838
Predicted protein (1040 aa)
       
      0.625
PGK
Phosphoglycerate kinase (448 aa)
   
 
  0.585
Phatr29157
Phosphoglycerate kinase (441 aa)
   
 
  0.585
Phatr14792
Phosphoglycerate kinase (432 aa)
   
 
  0.585
GAPN
Glyceraldehyde-3-phosphate dehydrogenase (588 aa)
   
  0.560
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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