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STRINGSTRING
Phatr30282 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr30282" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr30282Predicted protein; Belongs to the PI3/PI4-kinase family (341 aa)    
Predicted Functional Partners:
Phatr31423
Predicted protein (357 aa)
     
 
  0.923
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
     
 
  0.920
Phatr49312
Predicted protein (1592 aa)
     
 
  0.918
Phatr21501
Predicted protein; Belongs to the PI3/PI4-kinase family (175 aa)
     
 
0.916
Phatr16364
Predicted protein; Belongs to the PI3/PI4-kinase family (288 aa)
     
 
0.915
Phatrdraft1611
PhospholipasePredicted protein (889 aa)
     
  0.915
PLC-delta
Phospholipase C isoform delta (865 aa)
     
  0.915
Phatr17109
Predicted protein; Belongs to the PI3/PI4-kinase family (172 aa)
     
 
0.914
Phatr7164
Predicted protein; Belongs to the PI3/PI4-kinase family (170 aa)
     
 
0.913
Rab5a
Predicted protein (201 aa)
     
  0.889
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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