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STRINGSTRING
Phatr30461 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr30461" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr30461Predicted protein (463 aa)    
Predicted Functional Partners:
Phatr14208
Predicted protein; Belongs to the sterol desaturase family (249 aa)
      
  0.983
Phatr1971
Predicted protein (492 aa)
          
  0.902
Phatr31339
Predicted protein; Belongs to the cytochrome P450 family (482 aa)
      
 
  0.846
Phatr10852
Predicted protein; Belongs to the sterol desaturase family (167 aa)
      
 
  0.842
Phatr48864
Reductase with NAD or NADP as acceptor; Belongs to the 3-beta-HSD family (395 aa)
      
 
  0.823
PHATR_645
Terpene cyclase/mutase family member; Acetyl-coenzyme A synthetase; Belongs to the terpene cyclase/mutase family (678 aa)
      
   
  0.806
Phatr23913
Acetyl-coa c-acetyltransferase; Belongs to the thiolase family (396 aa)
      
   
  0.750
Phatr16649
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (461 aa)
      
   
  0.715
MK
Mevalonate kinase (490 aa)
      
   
  0.690
Phatr49447
Predicted protein (282 aa)
      
   
  0.690
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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