STRINGSTRING
Phatr30636 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr30636" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr30636Predicted protein (483 aa)    
Predicted Functional Partners:
Phatr15980
Predicted protein (119 aa)
   
        0.518
Phatr7660
Predicted protein (88 aa)
   
          0.517
Phatr5617
Predicted protein (239 aa)
   
          0.479
Phatr7136
Predicted protein (147 aa)
   
        0.462
Phatr49182
Predicted protein (312 aa)
   
          0.447
Phatr9078
Predicted protein (105 aa)
   
          0.446
Phatr6626
Predicted protein (141 aa)
   
          0.444
Phatr30466
Predicted protein (361 aa)
   
        0.442
Phatr7784
Predicted protein (79 aa)
   
          0.406
Phatr43169
Predicted protein (404 aa)
   
        0.405
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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