STRINGSTRING
Phatr30660 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr30660" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr30660Predicted protein (273 aa)    
Predicted Functional Partners:
Phatr19025
Predicted protein (205 aa)
 
  0.999
Phatr15632
Predicted protein (119 aa)
   
  0.999
Phatr28359
Predicted protein (229 aa)
   
  0.999
Phatr25714
Ribosomal protein L15 (205 aa)
   
  0.999
Phatr33660
Predicted protein (253 aa)
   
  0.999
Phatr51291
Predicted protein (121 aa)
   
  0.999
Phatr48699
Predicted protein (217 aa)
   
  0.999
Phatr43162
Predicted protein (146 aa)
   
  0.999
Phatr29177
Predicted protein (185 aa)
   
  0.999
Phatr28979
Predicted protein (164 aa)
   
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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