STRINGSTRING
PPO protein (Phaeodactylum tricornutum) - STRING interaction network
"PPO" - Protoporphyrinogen oxidase in Phaeodactylum tricornutum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPOProtoporphyrinogen oxidase (520 aa)    
Predicted Functional Partners:
Phatr33017
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (711 aa)
   
 
  0.982
HemF_3
Coproporphyrinogen oxidase (292 aa)
   
 
  0.980
Phatr26952
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (421 aa)
 
 
  0.978
HemF_1
Coproporphyrinogen III oxidase (304 aa)
   
 
  0.976
HemF_2
Coproporphyrinogen oxidase. coproporphyrinogen III oxidase. coproporphyrinogenase (292 aa)
   
 
  0.976
Phatr51528
Predicted protein (377 aa)
       
  0.945
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
   
 
  0.936
Phatr10100
Annotation not available (1250 aa)
   
 
  0.933
hemE
Uroporphyrinogen decarboxylase (366 aa)
 
   
  0.802
HemA
Glutamyl-tRNA reductase (512 aa)
   
   
  0.776
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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