STRINGSTRING
Phatr31234 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31234" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31234Predicted protein (174 aa)    
Predicted Functional Partners:
Phatr16069
Predicted protein (532 aa)
 
   
    0.678
Phatr19949
Predicted protein (393 aa)
 
   
    0.650
Phatr34028
Predicted protein (294 aa)
            0.624
Phatr12329
Predicted protein (207 aa)
 
          0.604
GDCP
Glycine decarboxylase p-protein (1005 aa)
       
    0.568
Gsr_1
Glutathione-disulfide reductase (507 aa)
   
 
    0.540
Gsr_2
Glutathione reductase (496 aa)
   
 
    0.540
Phatr48393
Predicted protein (654 aa)
       
    0.537
Phatr45428
Predicted protein (675 aa)
       
    0.537
Phatr42129
Annotation not available (479 aa)
       
    0.537
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (4%) [HD]