STRINGSTRING
Phatr31339 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31339" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31339Predicted protein (482 aa)    
Predicted Functional Partners:
Phatr48260
Predicted protein (467 aa)
   
  0.979
Phatr49447
Predicted protein (282 aa)
     
 
  0.930
NRPS
Non ribosomal peptide synthase (1367 aa)
     
  0.896
Phatr13160
Predicted protein (314 aa)
 
 
  0.871
Phatrdraft1638
Predicted protein (548 aa)
       
      0.870
PHATR_645
Acetyl-coenzyme A synthetase (678 aa)
   
 
  0.867
Phatr10852
Predicted protein (167 aa)
     
 
  0.866
Phatr48864
Reductase with NAD or NADP as acceptor (395 aa)
   
  0.856
Phatr14208
Predicted protein (249 aa)
     
 
  0.838
PSY
Phytoene synthase (309 aa)
   
 
  0.826
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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