STRINGSTRING
Phatr31367 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31367" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31367Predicted protein (819 aa)    
Predicted Functional Partners:
Phatr12373
Predicted protein (224 aa)
   
 
  0.956
Phatr17860
Predicted protein (253 aa)
     
 
  0.955
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
       
  0.887
Phatr24739
Predicted protein (1594 aa)
       
  0.887
FAO1
Peroxisomal bifunctional enzyme (767 aa)
   
 
  0.822
Phatr35240
Predicted protein (684 aa)
   
 
  0.822
Phatr49253
Predicted protein (566 aa)
   
 
  0.764
Phatr5527
Predicted protein (170 aa)
   
 
  0.764
Phatr55192
Hydratase enyol-coa hydratase (269 aa)
 
 
  0.764
Phatr54528
Enoyl-coa hydratase; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite (385 aa)
   
 
  0.764
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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