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STRINGSTRING
Phatr31367 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31367" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31367Predicted protein (819 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
   
   
  0.889
Phatr14192
Predicted protein; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (311 aa)
   
 
  0.864
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.850
Phatr51092
Glutamine synthetase (416 aa)
   
   
  0.818
Phatr21354
Predicted protein (422 aa)
   
   
  0.817
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
   
   
  0.786
Phatr18027
Predicted protein (706 aa)
   
   
  0.786
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.780
Phatr12373
Predicted protein (224 aa)
   
 
  0.760
Phatr17860
Predicted protein (253 aa)
   
      0.752
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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