STRINGSTRING
PHATR_3140 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_3140" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_3140Predicted protein (196 aa)    
Predicted Functional Partners:
Phatr10025
Predicted protein (295 aa)
 
 
  0.998
Phatr19324
Predicted protein (554 aa)
 
 
  0.998
Phatr50453
Predicted protein (279 aa)
   
 
  0.995
Phatr38891
Predicted protein (373 aa)
 
   
  0.994
Phatr9654
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (347 aa)
   
  0.981
Phatr12888
Predicted protein (202 aa)
 
 
  0.958
Phatr12810
Predicted protein (202 aa)
 
 
  0.958
Phatr47791
Predicted protein (2240 aa)
       
      0.911
Phatr2217
Predicted protein (364 aa)
       
    0.901
Phatr23920
Predicted protein (503 aa)
       
  0.865
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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