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STRINGSTRING
Phatr31650 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31650" - Solute carrier in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31650Solute carrier (590 aa)    
Predicted Functional Partners:
Phatr23292
L-galactono-1,4-lactone dehydrogenase (572 aa)
     
   
  0.692
Phatr54049
Acetyl-coa transporter (646 aa)
     
   
  0.669
Phatr47062
Predicted protein (374 aa)
           
  0.571
Phatr45443
Carbonic anhydrase; Reversible hydration of carbon dioxide (273 aa)
           
  0.558
METH
Methionine synthase (1245 aa)
           
  0.558
Phatr51305
Carbonic anhydrase; Reversible hydration of carbon dioxide (282 aa)
           
  0.555
Phatr29736
Predicted protein; Uricase (247 aa)
   
   
  0.518
Phatr35101
Predicted protein (570 aa)
   
   
  0.478
Phatr44618
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family (663 aa)
         
  0.460
Phatr38362
2-isopropylmalate synthase (581 aa)
         
  0.460
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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