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STRINGSTRING
Phatr31663 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31663" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31663Predicted protein (192 aa)    
Predicted Functional Partners:
Phatr44981
Predicted protein (367 aa)
   
 
  0.691
Phatr16021
Predicted protein (160 aa)
         
  0.591
Phatr14212
Predicted protein (308 aa)
         
  0.578
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
   
   
  0.512
Phatr18027
Predicted protein (706 aa)
   
   
  0.512
Phatr6914
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins (160 aa)
     
 
  0.472
Phatr16962
Predicted protein (209 aa)
         
  0.467
Phatr43559
Predicted protein (391 aa)
   
   
  0.458
Phatr21922
Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (306 aa)
   
   
  0.458
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
         
  0.456
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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