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Phatr31683 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31683" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31683Predicted protein (426 aa)    
Predicted Functional Partners:
Phatr19000
Farnesyltranstransferase (337 aa)
   
  0.947
Phatr2738
Predicted protein (235 aa)
 
 
  0.946
Phatr47271
Predicted protein (330 aa)
     
  0.945
Phatr37858
Predicted protein (398 aa)
   
 
  0.912
Phatr12269
Predicted protein (300 aa)
   
 
  0.912
Phatr12807
Predicted protein (326 aa)
 
 
  0.817
Phatr33017
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (711 aa)
 
   
  0.743
Phatr12373
Predicted protein (224 aa)
   
 
  0.739
Phatr17860
Predicted protein (253 aa)
   
 
  0.718
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
 
   
  0.701
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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